| Cryptococcus neoformans |
BER Display For 163.m02353 |
Home
| Logged into [cna1] as egc
|
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163.m02353(-78 - 606 of 633 aa)
GB|AAP04416.1|30025890|AY251281(780 - 1418 of 1474) hypercellular protein A {Emericella nidulans;}
%Match = 10.2
%Identity = 30.2 %Similarity = 50.1
Matches = 180 Mismatches = 276 Conservative Sub.s = 119
Gaps = 22 InDels = 522 Frame Shifts = 0
Primary Frame = 1 [575, 0, 0]
aggtgtagag
tcattcacca
gaagcaatcc
-91
MAELVSKATD
RFTVELLQTIRGDLMLSKSSYTAPCLQPDEQIRLLNNIKRTVGAANRLGVAGLEAEYWDDFLVRGVELLSLSDPKRPVRR
700 710 720 730 740 750 760
gaggggaaggagcggacgctttaccaaaagaagggagacgtagagctgttgcaatcctttcactccccagtggagcaggt
gagtggaaagagagcagacttaacgcggtgtgtgaatgtttccacgactgggctaaggatttctgctactttcaaatatt
ctcgacagtaggatcgatatacctaatgtgttgtcggtttaatatagtactccctacatcttggtgggtgaaatgacact
-81 -71 -61 -51 -41 -31 -21 -11
GNGVGGKKDGKGQGAKRDPFLYNPRTSRIGISVGDKVSLVLTAKAR*ALCGRTIYQR*YFLIPLRPLQTVLVANEQIEVF
: :|:||||||| | : : ::|| |:
SKSELDAVTATSEKSKKDPFLYNPFTKS----------------------------------ANKASELLMVAGEHAAFQ
780 790 800 810
gatcactgtcaaaagataaatggcccacttggtacgttacagcctgtgcacgagcaagatccctggtgggttccctggag
tctgactctctataatcttccgcctacacaatctcctctactgtcctccgcgttatggtctgtcagcccatatcttaaaa
gtaaccctcagtcgtgttaacccccccaacaacctcatcatcccccggccgtttacgtccttcgcttcactctctgctga
-1 10 20 30 40 50 60 70
VTLRNPFAFPMNIKDMSIITSGAPLHTQSYEVSIPALSIQTVRLSALAPSPGIVQIRGISLRLSDGSAADFYLPLLDDKE
|||:||: | : |: : : : | || : : :| | :| | : :| | ::: | |::
VTLQNPYEFEVEIERIRLESEGVPLDAVAEYILLPPLCLQDVTVYGIAQEEGTLKVTGCSVK------------------
830 840 850 860 870
tcaagccccagcac tcg gactgagaaagtgggaaaaggaaaggagatgacattgt
gaagagagaaagtg gga cagcgtaggccgaaatttaaagtgaaaaatagtagtag
taggaagtagaaaa tat gagaagcggcgggaatagaggggaaagacggcgggggc
80 95 105 115 125
CQKRERQRQKERIR-CRD------------------------AKRSGMDRRTAWEEEIIMKEERMREEKENLESLKWLEC
:| ||: ||: :|| :| |: : || |:: |
------------VRYCRERSKPIFKDFWKPDIEAKFKRTGLAAKKPSVDRPLSWSS-TFSKDGK-PSTKEGPETF-SCEV
880 890 900 910 920 930 940
ggggctccgtaaaaatacgagaccaggataacaacgaatcacaatcacttggtagcggaagacgagcgggggtgtgtgga
attactctcgtagcctcagtcttaagaccctatctaaccctctaatatctaacctgcccgttaaaatgcaacaatagatg
gagaggggtgagtatggtaggggcctacgttgcacacgcccttcctatacacttgaggggagagtgaaggggcggtgtgg
135 145 155 165 175 185 195 205
EVVEPLPLAWIKSTTLTHGMAMLHNGETSTIQITLENTSPIPINYLKLSFEDSTVRAATRVMQENELGAEEAYELDWDVR
:|: | | ::| :|:: |: || |: ||| ||| :::: ::|:||| : : :| | ||| :
KVIRPQPSLVVESLSLSQSAVMILEGERSSFTITLRNTSSCDLDFILFTFQDSTTKQIQTALSNKDLLPIEVYELALKL-
960 970 980 990 1000 1010 1020
aaagtatgacaacgggggggtcagcgga agtaaatcgaggtaggcgcagtgcgctatcgtacaggggccacaaatg
aggttcgaactctgcgagaagtttcggg attatagtgatggtagttgtaagatactcggccacaacattcctcccc
tgtttggatcgcattgggcatccagtag agggaatttaaatcggcagtctcttatatatgcagctccctacataca
215 225 234 244 254 264 274
NRSVFTWENPMTLGAGEGDECLIVPGGR-KVLKIKCLGKVGCIEGLVRIDYGHVQSISRGSTQTDDADLLTPITTSA---
| : | | | :| |: : | :| | | |:||| : :: |
TRPALQW---RREGLNPSD--YSIPAGQCATFTIDVVGNPGLQEATVQIDYCSI-----------------GVSYEALPD
1030 1040 1050 1060 1070
attaccaatcgctagacacgtctcgaaccgctgaagttacgaagaaacgacgggagg caagtgcgaata cttggt
ctacgatctctttctcactagactatcatgagcaagacccgtagcaatatcaaaaga tgactcgaaatc agttgt
ccccaacactggcaggtccatcccccctctttgtttctcaattcctccgtggatccc gagggagactgg ctgggg
291 301 311 321 331 347 356
TFYTRQITFPVLFTVTHTLECHSLDITHLGHCANNGYSTPGINGTNNLEIPEEDNGD----LRKALARENNLT-HCLVGL
||||||: |: || :|| || | :: :| : : |: : : | : ||| : ||:: |
TFYTRQLFIPLTATVNASLEIARCDI--LPFSSDFAWSNDPNSASATLDSSDSASSDHFSTVLSNLARGTYGSDHCILLL
1090 1100 1110 1120 1130 1140 1150
aggagtggctggtttcagaagaaga ggtaccaccggagatagcaccatatcgactcc actctgcctgg
gtcatagtctatgtcgaaagcagaa tagggttccgccagtttctcgactcaattcac tcctcagaatt
ctccatcaataacgccgcagggcat agtagtccgatcaggcctatcagcgaccttaa ttccaaagcgt
366 376 385 395 405 414 424
SVANVYGVPFEVCLSRKDKRAKSEN-----------VECRRLIPPGATERLIVPIPRKSISQDILSQP-IPSLSERQYVV
: | : |: | | | :| : | : || | |::: :|| | | | : : |:||:||
DLRNAWPNPLSVALHVTDVPHESPDRAAAPTDGAGRYTLRETLQPGQTSRFVLVVPRVYIQNPHASIPSLNTGSKRQFVV
1170 1180 1190 1200 1210 1220 1230
gagaatctaagcgcgctttcggttgacgcatagcgtcacgacaccacacacatccgtagggagacgatc gcgagg
aaaaacgcgtctagattgagacttattatcgcacgcagaggtttgaattccgttattgcactatgtttg ggaaag
cgggactagttggcattgccaaagtggtgtgaacagaactctacacacgtttatatcatccccttgtga aagatt
434 444 454 464 474 484
DKEKKSRSRIALERELFWYREALLDMLDLTWTEPGSQRHGSLILRNQILTPSLLQVFRADAIDIRVILR----GREKDG-
| : | || ||||| || : :| | | |:: ||| :| :: || : :: |: | |:|
SAHKLTFDAEAAAREAFWYREELLKRVSGSWKEALGNREGTIDLRNMRFTARMVDAFRLEDVETSFSLKPSFSGSAKNGV
1250 1260 1270 1280 1290 1300 1310
ggcgagtggcggggaaatgcctcctaacg tccattagtttgccatatccccagcctcgccccagttg
atactattatttatcaatagcagcatatc gtcccccaacgcgccctagccccaaacacacagattta
taaagttttcgtggttcgactctacctca tccgccacttgttatccctttccaatacacttatcatt
507 517 527 536 546 556 566
------------DVQAMDFVDLVVEVTNNLERPYRPYINLA-CLPTSSTDYSWARPTSIYRPPPTEQHSHAHPHRNVLFD
| : :|| | | | || | : | | :: : | | : :
SDLVIQTGNSRYRVGTDEMLDLTVTVHNRSSRPIHPLLRLQPSLCNQPSNVALDLP------------------RRLAWT
1330 1340 1350 1360 1370
atcggctaatcaggaggtgggaattgaggtgtagtgggaaaagcgggggcgggaagtttcgtcgcgctaacttaagatgc
gaccgctcttaagaaataatgtcttcggaagtgcctaatagaagagataatgagatgtccttatattaaagttttaagtc
tcatttggggagcgatccagcggcattggcccatatagcgaacaagcgggtagagcgtgaggacgtcatgcttcgtcaca
576 586 596 606 616 626 636 646
SYPAGPLTMLQKGEKDVYEVGMTFLASGEYGFRASVEEIKRKDREGDVEQVGERKVWFSPVLQVQVL*NKRFFIMDN*VP
| :| || ||:| | ||| | |:|||:: | | : : | |
GMLQQVLPVLNSGESTSTTVGVTILCRGEYEFGATVEELRLLRLPSETEGNKITSDDASTPIPYEEGFITDTFGADMAKK
1390 1400 1410 1420 1430 1440 1450
163.m02353(-78 - 606 of 633 aa)
GB|AAF87048.1|9309269|AF001273(724 - 1362 of 1418) hypercellular protein {Emericella nidulans;}
%Match = 10.2
%Identity = 30.2 %Similarity = 50.1
Matches = 180 Mismatches = 276 Conservative Sub.s = 119
Gaps = 22 InDels = 522 Frame Shifts = 0
Primary Frame = 1 [575, 0, 0]
aggtgtagag
tcattcacca
gaagcaatcc
-91
MAELVSKATD
RFTVELLQTIRGDLMLSKSSYTAPCLQPDEQIRLLNNIKRTVGAANRLGVAGLEAEYWDDFLVRGVELLSLSDPKRPVRR
650 660 670 680 690 700 710
gaggggaaggagcggacgctttaccaaaagaagggagacgtagagctgttgcaatcctttcactccccagtggagcaggt
gagtggaaagagagcagacttaacgcggtgtgtgaatgtttccacgactgggctaaggatttctgctactttcaaatatt
ctcgacagtaggatcgatatacctaatgtgttgtcggtttaatatagtactccctacatcttggtgggtgaaatgacact
-81 -71 -61 -51 -41 -31 -21 -11
GNGVGGKKDGKGQGAKRDPFLYNPRTSRIGISVGDKVSLVLTAKAR*ALCGRTIYQR*YFLIPLRPLQTVLVANEQIEVF
: :|:||||||| | : : ::|| |:
SKSELDAVTATSEKSKKDPFLYNPFTKS----------------------------------ANKASELLMVAGEHAAFQ
730 740 750
gatcactgtcaaaagataaatggcccacttggtacgttacagcctgtgcacgagcaagatccctggtgggttccctggag
tctgactctctataatcttccgcctacacaatctcctctactgtcctccgcgttatggtctgtcagcccatatcttaaaa
gtaaccctcagtcgtgttaacccccccaacaacctcatcatcccccggccgtttacgtccttcgcttcactctctgctga
-1 10 20 30 40 50 60 70
VTLRNPFAFPMNIKDMSIITSGAPLHTQSYEVSIPALSIQTVRLSALAPSPGIVQIRGISLRLSDGSAADFYLPLLDDKE
|||:||: | : |: : : : | || : : :| | :| | : :| | ::: | |::
VTLQNPYEFEVEIERIRLESEGVPLDAVAEYILLPPLCLQDVTVYGIAQEEGTLKVTGCSVK------------------
770 780 790 800 810 820
tcaagccccagcac tcg gactgagaaagtgggaaaaggaaaggagatgacattgt
gaagagagaaagtg gga cagcgtaggccgaaatttaaagtgaaaaatagtagtag
taggaagtagaaaa tat gagaagcggcgggaatagaggggaaagacggcgggggc
80 95 105 115 125
CQKRERQRQKERIR-CRD------------------------AKRSGMDRRTAWEEEIIMKEERMREEKENLESLKWLEC
:| ||: ||: :|| :| |: : || |:: |
------------VRYCRERSKPIFKDFWKPDIEAKFKRTGLAAKKPSVDRPLSWSS-TFSKDGK-PSTKEGPETF-SCEV
830 840 850 860 870 880
ggggctccgtaaaaatacgagaccaggataacaacgaatcacaatcacttggtagcggaagacgagcgggggtgtgtgga
attactctcgtagcctcagtcttaagaccctatctaaccctctaatatctaacctgcccgttaaaatgcaacaatagatg
gagaggggtgagtatggtaggggcctacgttgcacacgcccttcctatacacttgaggggagagtgaaggggcggtgtgg
135 145 155 165 175 185 195 205
EVVEPLPLAWIKSTTLTHGMAMLHNGETSTIQITLENTSPIPINYLKLSFEDSTVRAATRVMQENELGAEEAYELDWDVR
:|: | | ::| :|:: |: || |: ||| ||| :::: ::|:||| : : :| | ||| :
KVIRPQPSLVVESLSLSQSAVMILEGERSSFTITLRNTSSCDLDFILFTFQDSTTKQIQTALSNKDLLPIEVYELALKL-
900 910 920 930 940 950 960
aaagtatgacaacgggggggtcagcgga agtaaatcgaggtaggcgcagtgcgctatcgtacaggggccacaaatg
aggttcgaactctgcgagaagtttcggg attatagtgatggtagttgtaagatactcggccacaacattcctcccc
tgtttggatcgcattgggcatccagtag agggaatttaaatcggcagtctcttatatatgcagctccctacataca
215 225 234 244 254 264 274
NRSVFTWENPMTLGAGEGDECLIVPGGR-KVLKIKCLGKVGCIEGLVRIDYGHVQSISRGSTQTDDADLLTPITTSA---
| : | | | :| |: : | :| | | |:||| : :: |
TRPALQW---RREGLNPSD--YSIPAGQCATFTIDVVGNPGLQEATVQIDYCSI-----------------GVSYEALPD
980 990 1000 1010 1020
attaccaatcgctagacacgtctcgaaccgctgaagttacgaagaaacgacgggagg caagtgcgaata cttggt
ctacgatctctttctcactagactatcatgagcaagacccgtagcaatatcaaaaga tgactcgaaatc agttgt
ccccaacactggcaggtccatcccccctctttgtttctcaattcctccgtggatccc gagggagactgg ctgggg
291 301 311 321 331 347 356
TFYTRQITFPVLFTVTHTLECHSLDITHLGHCANNGYSTPGINGTNNLEIPEEDNGD----LRKALARENNLT-HCLVGL
||||||: |: || :|| || | :: :| : : |: : : | : ||| : ||:: |
TFYTRQLFIPLTATVNASLEIARCDI--LPFSSDFAWSNDPNSASATLDSSDSASSDHFSTVLSNLARGTYGSDHCILLL
1040 1050 1060 1070 1080 1090 1100
aggagtggctggtttcagaagaaga ggtaccaccggagatagcaccatatcgactcc actctgcctgg
gtcatagtctatgtcgaaagcagaa tagggttccgccagtttctcgactcaattcac tcctcagaatt
ctccatcaataacgccgcagggcat agtagtccgatcaggcctatcagcgaccttaa ttccaaagcgt
366 376 385 395 405 414 424
SVANVYGVPFEVCLSRKDKRAKSEN-----------VECRRLIPPGATERLIVPIPRKSISQDILSQP-IPSLSERQYVV
: | : |: | | | :| : | : || | |::: :|| | | | : : |:||:||
DLRNAWPNPLSVALHVTDVPHESPDRAAAPTDGAGRYTLRETLQPGQTSRFVLVVPRVYIQNPHASIPSLNTGSKRQFVV
1110 1120 1130 1140 1150 1160 1170 1180
gagaatctaagcgcgctttcggttgacgcatagcgtcacgacaccacacacatccgtagggagacgatc gcgagg
aaaaacgcgtctagattgagacttattatcgcacgcagaggtttgaattccgttattgcactatgtttg ggaaag
cgggactagttggcattgccaaagtggtgtgaacagaactctacacacgtttatatcatccccttgtga aagatt
434 444 454 464 474 484
DKEKKSRSRIALERELFWYREALLDMLDLTWTEPGSQRHGSLILRNQILTPSLLQVFRADAIDIRVILR----GREKDG-
| : | || ||||| || : :| | | |:: ||| :| :: || : :: |: | |:|
SAHKLTFDAEAAAREAFWYREELLKRVSGSWKEALGNREGTIDLRNMRFTARMVDAFRLEDVETSFSLKPSFSGSAKNGV
1190 1200 1210 1220 1230 1240 1250 1260
ggcgagtggcggggaaatgcctcctaacg tccattagtttgccatatccccagcctcgccccagttg
atactattatttatcaatagcagcatatc gtcccccaacgcgccctagccccaaacacacagattta
taaagttttcgtggttcgactctacctca tccgccacttgttatccctttccaatacacttatcatt
507 517 527 536 546 556 566
------------DVQAMDFVDLVVEVTNNLERPYRPYINLA-CLPTSSTDYSWARPTSIYRPPPTEQHSHAHPHRNVLFD
| : :|| | | | || | : | | :: : | | : :
SDLVIQTGNSRYRVGTDEMLDLTVTVHNRSSRPIHPLLRLQPSLCNQPSNVALDLP------------------RRLAWT
1270 1280 1290 1300 1310 1320
atcggctaatcaggaggtgggaattgaggtgtagtgggaaaagcgggggcgggaagtttcgtcgcgctaacttaagatgc
gaccgctcttaagaaataatgtcttcggaagtgcctaatagaagagataatgagatgtccttatattaaagttttaagtc
tcatttggggagcgatccagcggcattggcccatatagcgaacaagcgggtagagcgtgaggacgtcatgcttcgtcaca
576 586 596 606 616 626 636 646
SYPAGPLTMLQKGEKDVYEVGMTFLASGEYGFRASVEEIKRKDREGDVEQVGERKVWFSPVLQVQVL*NKRFFIMDN*VP
| :| || ||:| | ||| | |:|||:: | | : : | |
GMLQQVLPVLNSGESTSTTVGVTILCRGEYEFGATVEELRLLRLPSETEGNKITSDDASTPIPYEEGFITDTFGADMAKK
1340 1350 1360 1370 1380 1390 1400
163.m02353(-92 - 625 of 633 aa)
GB|CAD71240.1|28950272|NCB11H7(332 - 1439 of 1454) related to hypercellular protein (hypA) (fragment) {Neurospora crassa;}
%Match = 7.8
%Identity = 30.2 %Similarity = 48.5
Matches = 176 Mismatches = 277 Conservative Sub.s = 107
Gaps = 23 InDels = 2118 Frame Shifts = 0
Primary Frame = 1 [560, 0, 0]
aggtgtagaggaggggaagga
tcattcaccagagtggaaaga
gaagcaatccctcgacagtag
-100 -90 -80
MAELVSKATDGNGVGGKKDGK
: | | || | |
FKGGTFGSNRAVSGQPATPPNARSGLSNPPTNFDDITGDESASPEKALPPRPDLMDVFRTQSQDRVSVQGFGSGGSTDKK
280 290 300 310 320 330 340
gcggac gctttaccaaaagaagggagacgtagagct
gagcag acttaacgcggtgtgtgaatgtttccacga
gatcga tatacctaatgtgttgtcggtttaatatag
-64 -54 -44
GQGAKR--------------------~~~~--------------------DPFLYNPRTSRIGISVGDKVSLVLTAKAR*
: | :||:|||
LHRGKSRFQIVLGSLYLQAGRWIDAL~~~~SHARSVLPNAVTTTRTSQDVNPFIYNP-----------------------
360 370 800 810
gttgcaatcctttcac tccccagtggagcaggtgatcactgtcaaaagataaatggcccacttggtacgttacagcctg
ctgggctaaggatttc tgctactttcaaatatttctgactctctataatcttccgcctacacaatctcctctactgtcc
tactccctacatcttg gtgggtgaaatgacactgtaaccctcagtcgtgttaacccccccaacaacctcatcatccccc
-34 -25 -15 -5 6 16 26 36
ALCGRTIYQR*YFLIP-LRPLQTVLVANEQIEVFVTLRNPFAFPMNIKDMSIITSGAPLHTQSYEVSIPALSIQTVRLSA
:: | :: |||| | :|::| | : :: : : | || : : : | | :|:|
-----------FLKQPDAAAVEKVLVAGEAATFKLTFQNTFEMDLELESIRLDTEGAEFESAVESLVIGPYRTQVLRISG
820 830 840 850 860 870 880
tgcacgagcaagatccctggtgggttccctggagtcaagccccagcactcggactgagaaagtgggaaaaggaaaggaga
tccgcgttatggtctgtcagcccatatcttaaaagaagagagaaagtgggacagcgtaggccgaaatttaaagtgaaaaa
ggccgtttacgtccttcgcttcactctctgctgataggaagtagaaaatatgagaagcggcgggaatagaggggaaagac
46 56 66 76 86 96 106 116
LAPSPGIVQIRGISLRLSDGSAADFYLPLLDDKECQKRERQRQKERIRCRDAKRSGMDRRTAWEEEIIMKEERMREEKEN
: : | ::|:| |:| || :
VPKAAGTLRIKGA------------------------------------------------------IIKVRGCRERRFP
900
tgacat tgtggggctccgtaaaaatacgagaccaggataacaacga
tagtag tagattactctcgtagcctcagtcttaagaccctatctaa
ggcggg ggcgagaggggtgagtatggtaggggcctacgttgcacac
132 142 152 162
LESLKW----------------------------------LECEVVEPLPLAWIKSTTLTHGMAMLHNGETSTIQITLEN
: :| || |: |: :||:|| : |: || :||:|
IFIEQWAPEKEQKVKGIGLAALDVPPAKRTPPTQRPKPESLELNVIAEQPVVVVKSSTLPQSSVMILEGERQKFSVTLQN
920 930 940 950 960 970 980
atca caatcacttggtagcggaagacgagcgggggtgtgtggaaaagtatgacaacgggggggtcagcggaagtaaatc
ccct ctaatatctaacctgcccgttaaaatgcaacaatagatgaggttcgaactctgcgagaagtttcgggattatagt
gccc ttcctatacacttgaggggagagtgaaggggcggtgtggtgtttggatcgcattgggcatccagtagagggaatt
171 181 191 201 211 221 231 241
TSPI-PINYLKLSFEDSTVRAATRVMQENELGAEEAYELDWDVRNRSVFTWENPMTLGAGEGDECLIVPGGRKVLKIKCL
| |:::| :||:||| | : | || : : : : : : | ||| : : |
LSTTTPVDFLLFSFQDSTQEPLQAAMASRDATPAELYEYELILAKKQA------LRIRKEGNQKRYIPPGGTATFDFEIL
1000 1010 1020 1030 1040 1050 1060
gaggtaggcgcagtgcgctatcgtacaggggc cacaaatga ttaccaatcgctagacacgtctcgaaccgctgaagtt
gatggtagttgtaagatactcggccacaacat tcctccccc tacgatctctttctcactagactatcatgagcaagac
taaatcggcagtctcttatatatgcagctccc tacatacac cccaacactggcaggtccatcccccctctttgtttct
251 261 271 280 289 299 309 319
GKVGCIEGLVRIDYGHVQSISRGSTQTDDADL-LTPITTSAT-FYTRQITFPVLFTVTHTLECHSLDITHLGHCANNGYS
|| | ||:::|| | | : | |:|||::: : || ::| :|: |
GKPGLTHGLIQVDY---------------ACLGVPPDELEEERFFTRQVSLALTVTVNASIEIARMDVFPL---------
1080 1090 1100 1110
acgaagaaacgacgg gaggcaagtgcgaatacttggtaggagtggctggtttcagaagaagaggtaccaccggagat
ccgtagcaatatcaa aagatgactcgaaatcagttgtgtcatagtctatgtcgaaagcagaatagggttccgccagt
caattcctccgtgga tcccgagggagactggctggggctccatcaataacgccgcagggcatagtagtccgatcagg
329 336 346 356 366 376 386 396
TPGINGTNNLEIPEE---DNGDLRKALARENNLTHCLVGLSVANVYGVPFEVCLSRKDKRAKSENVECRRLIPPGATERL
: ||| | ::: : ||||: | : | : : | :| | || |:
--------HGSIPEPLWLRAGSNKESTSELTADTHCLLMLDLRNAWPSNMVIQLESED------GARLEEHILPGNVNRV
1130 1140 1150 1160 1170 1180
agcaccatatcgactccactct gcctgggagaatctaagcgcgctttcggttgacgcat agcg tcacgacacc
ttctcgactcaattcactcctc agaattaaaaacgcgtctagattgagacttattatcg cacg cagaggtttg
cctatcagcgaccttaattcca aagcgtcgggactagttggcattgccaaagtggtgtg aaca gaactctaca
406 416 425 435 445 455 469
IVPIPRKSISQDILSQPIPSLS-ERQYVVDKEKKSRSRIALERELFWYREALLDMLDLTW-TEPG-----SQRHGSLILR
| || | : | |: : | :||::| | : || ||||| :|| | || | || | ||: ||
IFPIKRVYLEDPYASIPVLNPSRQRQFIV-SSKLTPEMERANREAFWYREKVLDSLTGTWRTGPGGGTIAGGRSGSIELR
1200 1210 1220 1230 1240 1250 1260
acacacatccgtagggagacgat cgcgaggggcgag tggcggggaaatgcctcctaacgtccattagt
aattccgttattgcactatgttt gggaaagatacta ttatttatcaatagcagcatatcgtcccccaa
cacgtttatatcatccccttgtg aaagatttaaagt tttcgtggttcgactctacctcatccgccact
479 489 498 507 517 527 537
NQILTPSLLQVFRADAIDIRVIL-----------RGREKDGDVQAMD-FVDLVVEVTNNLERPYRPYINLACLPTSSTDY
|| ::: : | | | : : : : | : :: |: | | ||| :| | : |
AMRLTSRMIEAVKVDEIGIEISVLDASASPSSPEKQKHKSHAIAKVESFLQLRVAVTNRTNQPIYPLVRLM---------
1280 1290 1300 1310 1320 1330
ttgccatatccccagcctcgccccagttg atcggctaatcaggaggtgggaattgaggtgtagtggga
cgcgccctagccccaaacacacagattta gaccgctcttaagaaataatgtcttcggaagtgcctaat
tgttatccctttccaatacacttatcatt tcatttggggagcgatccagcggcattggcccatatagc
547 557 569 579 589 599
SWARPTSIYRPPPTEQHSHAHPHRNVLFD--------SYPAGPLTMLQKGEKDVYEVGMTFLASGEYGFRASVEEI----
| | || :| | :| || :|:| | ||: |||||
----------------PSLCHRPLNVALDFTRKFAWNGTLQKALPLLAGGESAEVVMGVTALCRGEFEISASVEETMVWR
1340 1350 1360 1370 1380 1390
aaagcgggggcgg gaagtttcgtcgcgctaacttaagatgcttttgagttgattgatatt
agaagagataatg agatgtccttatattaaagttttaagtcacggtactcctgttaattt
gaacaagcgggta gagcgtgaggacgtcatgcttcgtcacattatatactaaataatacc
608 618 625 635 645 655 665
-----------------KRKDREGDVEQVG---ERKVWFSPVLQVQVL*NKRFFIMDN*VPYS*CVNAFSAI*FVKYIFF
| :| :| | ||:|| | |:
PSEEEEEERRKRRSEVEKMQDAAMGMEIAGSKRERRVWCSRRPARVVVIRNDMDD
1410 1420 1430 1440 1450
163.m02353(-82 - 568.3 of 633 aa)
PIR|T39055|T39055(630 - 1175 of 1210) hypothetical protein SPAC6G10.05c - fission yeast (Schizosaccharomyces pombe) {Schizosaccharomyces pombe;} ^|^GB|CAB11291.1|2330869|SPAC6G10 TRAPP (predicted); involved in intracellular protein transport (predicted); similar to S. cerevisiae TRS120 {Schizosaccharomyces pombe;}
%Match = 5.5
%Identity = 25.5 %Similarity = 48.2
Matches = 135 Mismatches = 258 Conservative Sub.s = 120
Gaps = 16 InDels = 514 1
Primary Frame = 1 [483, 30, 0]
aggtgtagaggaggggaaggag
tcattcaccagagtggaaagag
gaagcaatccctcgacagtagg
-99 -89 -79
MAELVSKATDGNGVGGKKDGKG
: : | ::|
DYRSILLLISLFFLTSVQTASSSQQISMFKAFRKTYLFASNAGIHINAPYWDPFMITDLKFIGSSENAELIHQRLRNGLP
570 580 590 600 610 620 630
cggacgctttaccaaaagaagggagacgtagagctgttgcaatcctttcactccccagtggagcaggtgatcactgtcaa
agcagacttaacgcggtgtgtgaatgtttccacgactgggctaaggatttctgctactttcaaatatttctgactctcta
atcgatatacctaatgtgttgtcggtttaatatagtactccctacatcttggtgggtgaaatgacactgtaaccctcagt
-69 -59 -49 -39 -29 -19 -9 2
QGAKRDPFLYNPRTSRIGISVGDKVSLVLTAKAR*ALCGRTIYQR*YFLIPLRPLQTVLVANEQIEVFVTLRNPFAFPMN
: :: ||:||| | ::||| :||: : :|||:: :
KSIEKGPFIYNPFNRR---------------------------------QDQNQSKSVLVVDEQVAFSIYFRNPLSVSVE
650 660 670 680
aagataaatggcccacttggtacgttacagcctgtgcacgagcaagatccctggtgggttccctggagtcaagccccagc
taatcttccgcctacacaatctcctctactgtcctccgcgttatggtctgtcagcccatatcttaaaagaagagagaaag
cgtgttaacccccccaacaacctcatcatcccccggccgtttacgtccttcgcttcactctctgctgataggaagtagaa
12 22 32 42 52 62 72 82
IKDMSIITSGAPLHTQSYEVSIPALSIQTVRLSALAPSPGIVQIRGISLRLSDGSAADFYLPLLDDKECQKRERQRQKER
::|: : | | :: |||: |: | ::| | ::: |: ||
VQDVHLETKGVSAKCSHSTFTMRPLSIERTTLTVTPTETGELHIVGCRVKVFGCEPILQYVYEAKDKH------------
700 710 720 730 740
actcggactgagaaagtgggaaaaggaaaggagatgac attgtggggctccgtaaaaatacg
tgggacagcgtaggccgaaatttaaagtgaaaaatagt agtagattactctcgtagcctcag
aatatgagaagcggcgggaatagaggggaaagacggcg ggggcgagaggggtgagtatggta
92 102 112 124 134 144
IRCRDAKRSGMDRRTAWEEEIIMKEERMREEKENLESL------------------KWLECEVVEPLPLAWIKSTTLTHG
: : : |: :: | || | ::| |: | : || |
------------------KSLHVYLEKSKDVNAELRSLDTIDHLWTYFPFKKDLKTKSFDCIVIASQPKLSLAFQNLTSG
750 760 770 780 790 800 810
agaccaggataacaacgaatcacaatcacttggtagcggaagacgagcgggggtgtgtggaaaagtatga caacgggg
tcttaagaccctatctaaccctctaatatctaacctgcccgttaaaatgcaacaatagatgaggttcgaa ctctgcga
ggggcctacgttgcacacgcccttcctatacacttgaggggagagtgaaggggcggtgtggtgtttggat cgcattgg
154 164 174 184 194 204 214 222
MAMLHNGETSTIQITLENTSPIPINYLKLSFEDSTVRAATRVMQENELGAEEAYELDWDVRNRSVFTWEN--PMTLGAGE
: || : :|||| : ::: : ||||: :| : : : : |: ||| :: | || |: | :| ||
KFNFAEYETGELVYVIENTSFVEASHISVLFEDSSSKAFEQAIADKSITADRLYELQFEEFNLPTFTVESSQPFSLSPGE
830 840 850 860 870 880 890
gggtcagcggaagtaaatcgaggtaggcgcagtgcgctatcgtacag gggccacaaatgattaccaatcgctagac
gaagtttcgggattatagtgatggtagttgtaagatactcggccaca acattcctccccctacgatctctttctca
gcatccagtagagggaatttaaatcggcagtctcttatatatgcagc tccctacatacaccccaacactggcaggt
232 242 252 262 278 288 298
GDECLIVPGGRKVLKIKCLGKVGCIEGLVRIDYGHVQSISRGSTQTD----DADLLTPITTSATFYTRQITFPVLFTVTH
| |:: :: ::| :: : | | || |:: || : ::
RREI------------------------------HIKIRAKPNSQEGLILFESSVHKPEDT--EFYVRRLRIPVSLNISK
900 910 920 930
acgtctcgaaccgctgaagttacgaagaaacgacgggaggcaa gtgcgaatacttggtaggagtggctggtttcaga
ctagactatcatgagcaagacccgtagcaatatcaaaagatga ctcgaaatcagttgtgtcatagtctatgtcgaaa
ccatcccccctctttgtttctcaattcctccgtggatcccgag ggagactggctggggctccatcaataacgccgca
308 318 328 338 345 355 365 375
TLECHSLDITHLGHCANNGYSTPGINGTNNLEIPEEDNGDLRK---ALARENNLTHCLVGLSVANVYGVPFEVCLSRKDK
: ||:: : | : ::||| |: | : | | |
RV-------------------------------------DLKQWSAFMDTEGDPSYCLVLLNFYNHFSEP----LFVTVK
950 960 970
agaagaggtac caccggagatagcaccatatcgactccactctgcctgggag aatctaagcgcgctttcggttgacgc
gcagaataggg ttccgccagtttctcgactcaattcactcctcagaattaaa aacgcgtctagattgagacttattat
gggcatagtag tccgatcaggcctatcagcgaccttaattccaaagcgtcgg gactagttggcattgccaaagtggtg
385 394 404 414 424 433 443 453
RAKSENVECRR-LIPPGATERLIVPIPRKSISQDILSQPIPSLSERQYVVDKE-KKSRSRIALERELFWYREALLDMLDL
| :: | | || | | :: : | :| : :: ||:|| :|:|: ||| :: || :| :| :
TASTD--ESRSVLIKPKADNVILFRLKRFIMSSEEINLDIPNLSTKQFVLSSGFKKSIEDSYTMKKRFWIKEYFLKEVQA
990 1000 1010 1020 1030 1040 1050
atagcgtcacgacaccacacacatccgtagggagacg atcgcgaggggcgagtggcggggaaatgcctcctaacgtcca
cgcacgcagaggtttgaattccgttattgcactatgt ttgggaaagatactattatttatcaatagcagcatatcgtcc
tgaacagaactctacacacgtttatatcatccccttg tgaaagatttaaagttttcgtggttcgactctacctcatccg
463 473 483 492 502 512 522 532
TWTEPGSQRHGSLILRNQILTPSLLQVFRADAIDIRV-ILRGREKDGDVQAMDFVDLVVEVTNNLERPYRPYINLACLPT
:| : || : |||:||: : : | |: : || | : ||:| : : | |: | |
SWKTDDNLHHGEIYLRNHILSDEMANNLSILPIRIQAWVSYDSEKVTTVCPREPFKLVLEFFGHADTNMRYKISWTQLNT
1070 1080 1090 1100 1110 1120 1130
ttagtt gcg ccctagccccaaacacacagatttagaccgctcttaagaaataatgtcttcggaagtgcctaataga
cccaac gtt atccctttccaatacacttatcatttcatttggggagcgatccagcggcattggcccatatagcgaa
ccactt t gcc atatccccagcctcgccccagttgatcggctaatcaggaggtgggaattgaggtgtagtgggaaaag
539.3 548.3 558.3 568.3 578.3 588.3 598.3 608.3
SSTDYS- -GLV-QLPSTVLLPPNNIHTHTLIEMSYLIVTQLVL*RCCKRARKMSTKWA*RS*LVGSTASELQLKRSREK
: | ||: | :: || | :|| : : | : : : | : |
QANTSSFNGLILDGPEEDIVCFNNSKCHVVIERNMFAYTTGMYNIFVRIFNEELQLLSQPVDLDEPILLIVDAK
1150 1160 1170 1180 1190 1200 1210
| 26.0/49.0% over 522aa |
Dictyostelium discoideum |
| GB|AAO51854.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase DhkG Insert characterized
|
163.m02353(-22 - 489 of 633 aa)
GB|AAO51854.1|28829312|AC116986(803 - 1324 of 1449) similar to Dictyostelium discoideum (Slime mold). Histidine kinase DhkG {Dictyostelium discoideum;}
%Match = 4.2
%Identity = 25.9 %Similarity = 49.0
Matches = 99 Mismatches = 181 Conservative Sub.s = 88
Gaps = 14 InDels = 894 Frame Shifts = 0
Primary Frame = 1 [368, 0, 0]
aggtgtagaggaggggaaggagcggacgctttaccaaaagaagggagacgtagagctgttgcaat
tcattcaccagagtggaaagagagcagacttaacgcggtgtgtgaatgtttccacgactgggcta
gaagcaatccctcgacagtaggatcgatatacctaatgtgttgtcggtttaatatagtactccct
-96 -86 -76 -66 -56 -46 -36
MAELVSKATDGNGVGGKKDGKGQGAKRDPFLYNPRTSRIGISVGDKVSLVLTAKAR*ALCGRTIY
HSKALSLSINTNVHMNLLGLPFIVKVSPIQLPNQLEPIVRPSQQSLFAQREKNSNNFFIYSPYGGGFSNGSGIGGGGIGG
720 730 740 750 760 770 780 790
cctttcactccccagtggagcaggtgatcactgtcaaaagataaatggcccacttggtacgttacagcctgtgcac
aggatttctgctactttcaaatatttctgactctctataatcttccgcctacacaatctcctctactgtcctccgc
acatcttggtgggtgaaatgacactgtaaccctcagtcgtgttaacccccccaacaacctcatcatcccccggccg
-26 -16 -6 5 15 25 35
QR*YFLIPLRPLQTVLVANEQIEVFVTLRNPFAFPMNIKDMSIITSGAPLHTQSYEVSIPALSIQTVRLSALAPSP----
: | |: | ||| |||:| : |: ::: |:| |: :|| :| ||: :: |
GGSGGDSNSNRKKVVWAQGEECSVVVTLSNPFSFDIFIQSLTLSTAGVPF--ESYPLSFKILSLTDSMDIVISGKPLESG
800 810 820 830 840 850 860
gagcaagatccctggtgggttccctggagtcaag at
gttatggtctgtcagcccatatcttaaaagaaga cc
tttacgtccttcgcttcactctctgctgatagga gc
51 61 71 164
----------------~~~~--------------------GIVQIRGISLRLSDGSAADFYLPLLDDKECQKRE~~~~TS
| || ||: |::
PLIIKGVFVRAYNLLS~~~~KVLNLLAGESFSFNLEFQNIGTTQIDSISVSLNE--------------------~~~~--
880 970 980 990
cacaatcacttggtagcggaagacgagcgggggtgtgtggaaaagtatgacaacgggggggtcagcggaagtaaatcgag
ctctaatatctaacctgcccgttaaaatgcaacaatagatgaggttcgaactctgcgagaagtttcgggattatagtgat
ccttcctatacacttgaggggagagtgaaggggcggtgtggtgtttggatcgcattgggcatccagtagagggaatttaa
174 184 194 204 214 224 234 244
PIPINYLKLSFEDSTVRAATRVMQENELGAEEAYELDWDVRNRSVFTWENPMTLGAGEGDECLIVPGGRKVLKIKCLGKV
: ::: | | | | | | |:: : ::|| | || : |
------------------FDKALKKKTLADNNQYFTDSDDETIS-FQWDSNII-----KSSLPLLPGETFKLPIKSFSKP
1000 1010 1020 1030 1040 1050
gtaggcgcagt gcgctat cgtacaggggccacaaatgattaccaatcgctagacacgt
ggtagttgtaa gatactc ggccacaacattcctccccctacgatctctttctcactag
atcggcagtct cttatat atgcagctccctacatacaccccaacactggcaggtccat
254 272 282 292 302
GCIEGLVRIDY---------------------GHVQSIS-RGSTQTDDADLLTPITTSATFYTRQITFPVLFTVTHTLEC
| ||| : |::: |:||: | ||:|| | |:|| |: :::|| :
FLIGNQFIIDYYSNCENEEEEEEFNNTTTTTNTNTQTLTVTGNTQS---TLTATTTTTATKYQRKITIPLPLSITHGPQV
1070 1080 1090 1100 1110 1120 1130
ctcgaaccgctgaagttacgaa gaaacgacgggaggcaagtgcgaatacttggtagga gtggctggtttcag
actatcatgagcaagacccgta gcaatatcaaaagatgactcgaaatcagttgtgtca tagtctatgtcgaa
cccccctctttgtttctcaatt cctccgtggatcccgagggagactggctggggctcc atcaataacgccgc
312 322 330 340 350 360 365
HSLDITHLGHCANNGYSTPGIN--GTNNLEIPEEDNGDLRKALARENNLTHCLVGLSVAN-----VYGVPFEVCLSRKD-
::|| : | :: :|| | : || : :||: : : | : : |: | :
INFDIVYASSKIIKSLSPYLVDRSTSNNGLFKVEKDQDLIEKDCENIYNDYCLLLFDIKNCTSTHTFTISSELELGIPNI
1140 1150 1160 1170 1180 1190 1200 1210
aagaagaggtaccaccggagatagcaccatatcgactccactc tgcctgggagaatctaagcgcgctttcggttg
agcagaatagggttccgccagtttctcgactcaattcactcct cagaattaaaaacgcgtctagattgagactta
agggcatagtagtccgatcaggcctatcagcgaccttaattcc aaagcgtcgggactagttggcattgccaaagt
381 391 401 411 419 429 439 449
---KRAKSENVECRRLIPPGATERLIVPIPRKSISQDILSQPIPSL--SERQYVVDKEKKSRSRIALERELFWYREALLD
: : |: : :: | :|||: |:| | :| | :: ||: |:| : :: : :|:: |
VDNNKEINNNLSSKFILSPNGIITIIVPMKRES-----LPDQLPPLRQAKGQYIKPKKKLTEYEEYVKCLIQYYKDLLTS
1220 1230 1240 1250 1260 1270 1280
acgcatagcgtcacgacaccacacacatccgtagggagacgatcgcgaggggcgagtggcggggaaatgcctcctaacgt
ttatcgcacgcagaggtttgaattccgttattgcactatgtttgggaaagatactattatttatcaatagcagcatatcg
ggtgtgaacagaactctacacacgtttatatcatccccttgtgaaagatttaaagttttcgtggttcgactctacctcat
459 469 479 489 499 509 519 529
MLDLTWTEPGSQRHGSLILRNQILTPSLLQVFRADAIDIRVILRGREKDGDVQAMDFVDLVVEVTNNLERPYRPYINLAC
: | | :||::| | :|| |:: : | : |: : | |: :::
KIKLLWN-SSDNTNGSILLDNIVLTSKLIHKLNKDQVLIQFKNNKQLVKTIEQGGFETIEVLVTNLTNTPINGLVLHILP
1300 1310 1320 1330 1340 1350 1360
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Gene Curation Page